PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC02G10720.4
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family CPP
Protein Properties Length: 528aa    MW: 57964.5 Da    PI: 7.9927
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC02G10720.4genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR50.44.5e-16181220140
              TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                      k++kgC+C+ks+ClkkYCeCf+a+  Cs++C+C+dCkN e
  OPUNC02G10720.4 181 KHNKGCHCRKSECLKKYCECFQANILCSKNCRCQDCKNFE 220
                      589***********************************65 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5163428.96102221IPR005172CRC domain
PfamPF036381.2E-4112133IPR005172CRC domain
SMARTSM011140.22112136IPR033467Tesmin/TSO1-like CXC domain
SMARTSM011147.6E-18181222IPR033467Tesmin/TSO1-like CXC domain
PfamPF036382.8E-12184219IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    Send to blast
MYSARGLIWL IPPNSPPELA SDSSPPTSSP LFPSASTLLS ARVDQRRGLH LPLPREPPPT  60
GAAVLVRGIL AGSMPPVRPA TVAPPPPQKK PAVPVSRPWP MSFTPHPPPP PYCECFAARV  120
YCDGCHCSPC GNKIENENIR KEAIDTILLR NPLAFQPKIE NGPNTITVRK DNSEAMPPIP  180
KHNKGCHCRK SECLKKYCEC FQANILCSKN CRCQDCKNFE GSEERQALVQ MKNASDRDHI  240
QEAANFAPNC ATGSLGYKSS PAVRRKNYQE NSLGEQIRSE TQFQPLTPSC TGFGGDIASN  300
YQSKSSEMIY RSPLANTIPL IEVNDLVKHA LVACRKAPEA FLTKAGNKVE MQAEKQYQTN  360
DEINNDKNKE QNLKGASLKD IQNKASIDQQ NINETGPHLA NSFKDSRPAS PGTQALMCDE  420
LDTTFGNDDY RSPFVVPSCD QDISKLNADQ ERIVLTGLRD YLRVLITRGN INATKFSLET  480
AMELDSRRHH GATTVISQDK SMSSSCPETL GNNQTSMSND EQKGKSGG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0047711e-172AP004771.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0413A11.
GenBankAP0149581e-172AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence.
GenBankCP0126101e-172CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015623618.10.0PREDICTED: protein tesmin/TSO1-like CXC 5
RefseqXP_015623619.10.0PREDICTED: protein tesmin/TSO1-like CXC 5
TrEMBLA0A0E0JYD60.0A0A0E0JYD6_ORYPU; Uncharacterized protein
STRINGORGLA02G0108300.10.0(Oryza glaberrima)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29000.12e-71Tesmin/TSO1-like CXC domain-containing protein